参考のため，同じデータ（"R-cluster.data"）を〈PAUP*〉で計算したところ，８つの同等に最節約的な分岐図が得られた．その厳密合意樹を計算した．
●データ：NEXUS形式のデータファイル．
#NEXUS
[!*** This file are transported into R data matrix: "R-cluster.data" ***]
BEGIN DATA;
DIMENSIONS NTAX=22 NCHAR=28;
[!This data file contains a matrix of morphological characters from a
small group of ground beetles from the New World.
From:
Ball, G.E., and D.R. Maddison, 1987. Classification and evolutionary
aspects of the species of the New World genus Amblygnathus Dejean, with
description of Platymetopsis, new genus, and notes about selected
species of Selenophorus Dejean (Coleoptera: Carabidae: Harpalini).
Transactions of the American Entomological Society, 113: 189-307.
]
FORMAT SYMBOLS= " 0 1 2 3 4 5 6" MISSING=? GAP=- ;
CHARSTATELABELS
1 m.l._vent._flange / absent present,
2 elyt._micro. / isodiametric transverse,
3 body_length / '4.5-6.2mm' '6.3-7.0mm' '7.7-11.0mm' '>12.0mm',
4 pron._hind_ang. / rounded subangulate angulate,
5 #_int_sac_spines / none one two numerous,
6 spine_size / absent small medium large,
7 'spine loc''n' / absent scattered 'ventro-med' 'ventro-bas',
8 prostern._process / not ridged,
9 head_micros. / isodiam 'iso-transv' transv,
10 elytral_vest. / '7-9_+_ap1-6' '8-9_+_ap1-7' '9_+_ap1-8' '8-9' 9
'ap_1-8' 0,
11 'head + pron color' / black rufous metal. 'bl_+_flavous',
12 clypeal_margin / ｱ_straight concave,
13 left_mand._apex / normal broad,
14 spermatheca / short_curve long_coil,
15 male_lamina_width / broad narrow,
16 lamina_length / long moderate short absent,
17 lam._apex_dir. / straight right dorsal,
18 apex_shape / pointed blunt,
19 m.l._apex_form / v._short mod_straight long sinuate,
20 m.l._flange_bilo / not bilobed,
21 dorsal_flange / absent v._small small large,
22 female_terg.8_setae / absent present,
23 sac_microtrich. / normal enlarged,
24 leg_color / flavous black,
25 'm.l. vent.-sculp.' / smooth serrate,
26 elytral_color / black metallic bicolored,
27 'm.l. vent.-form' / tapered spatulate,
28 pron._base / constrict. moderate broadened
;
MATRIX
'seriatoporus-g' 1 0 1 0 3 3 1 0 0 3 0 0 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 1
'ellipticus-g' 1 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 1
'amaroides-g' 1 1 0 1 0 0 0 1 1 5 0 0 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 1
'ruficollis-g' 0 1 0 2 3 1 1 0 0 6 1 0 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 1
iripennis 0 1 0 1 1 3 2 0 1 0 0 1 1 1 0 0 1 0 1 0 2 0 0 0 0 0 0 1
mexicanus 0 1 0 0 2 2 2 0 1 0 0 1 1 1 0 0 1 0 2 0 3 0 0 0 0 0 0 1
interior 0 1 0 0 2 2 2 0 1 0 0 1 1 1 0 0 1 0 2 0 1 1 0 0 0 0 0 1
evansi 0 1 0 0 2 2 2 0 1 3 0 1 1 1 0 1 1 0 1 0 1 1 0 0 0 0 0 1
panamensis 0 1 0 1 2 2 2 0 1 0 0 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1
woodruffi 0 1 0 1 2 2 2 0 2 0 0 1 1 1 0 1 1 0 1 0 1 1 0 0 0 0 0 1
puncticollis 0 1 0 0 2 2 2 0 2 0 0 1 1 1 0 1 1 0 1 0 1 1 0 0 0 0 0 1
tikal 0 1 0 2 2 1 2 0 1 2 0 1 1 1 0 2 0 1 1 0 2 1 0 0 0 0 0 1
subtinctus 0 1 0 2 2 2 2 0 1 0 0 1 1 1 0 2 0 1 1 0 1 1 0 0 0 0 0 1
braziliensis 1 1 0 1 1 1 3 0 1 6 0 1 1 1 1 2 0 1 1 0 2 0 1 0 1 0 0 1
suturalis 1 1 1 1 1 1 2 0 2 1 3 1 1 1 1 2 0 1 1 0 2 0 1 0 1 2 0 1
geminatus 0 1 0 1 1 1 2 0 1 0 0 1 1 1 1 2 0 1 1 0 2 1 1 0 0 0 0 1
corvinus 0 1 2 1 1 1 2 0 1 4 0 1 0 1 1 0 0 1 2 0 2 0 0 1 1 0 0 2
cephalotes 1 1 2 1 0 0 0 0 1 0 0 1 0 1 1 0 0 1 3 0 2 1 0 1 0 0 0 1
gigas 1 1 3 1 0 0 0 0 1 0 0 1 0 1 1 0 0 1 3 0 2 1 0 1 0 0 0 1
reichardti 1 1 2 1 0 0 0 0 2 4 2 1 0 1 1 0 0 1 2 0 2 1 0 1 0 1 0 1
lucidus 1 1 2 1 0 0 0 0 2 4 2 1 0 1 1 0 0 1 2 0 2 1 0 1 0 1 0 1
janthinus 1 1 2 1 0 0 0 0 2 6 2 1 0 1 1 0 0 1 2 0 2 1 0 0 0 1 0 0
;
END;
BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ;
TYPESET * UNTITLED = unord: 7 11 26, ord: 1-6 8-10 12-25 27-28;
END;
●最節約分岐図（８つ）→ツリーファイル
●厳密合意樹→ツリーファイル
